SAPGUI Logon issue after Upgrade to NWBC 5.0

Hi

   We installed the NWBC 5.0 & SAPGUI 7.40 upgrade. The NWBC 5.0 works fine; however when we try to the "normal" SAPGUI login via the SAP Logonpad, we got the error message window "Error Parsing SAP GUI Command line ....."  (see print screen attach below).

I am assuming that this is due to new\missing config entries in the SAPUILandscape.xml in the Appdata\Roaming directory (???). I would thought the conversion from saplogon.ini to SAPUILandscape.xml happens automatically, is anybody aware as if manual intervention is still necessary.